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Research quality · Reproducibility · Animal research

ARRIVE vs PREPARE: reporting is not the same as planning

Damien Huzard, PhD

Two acronyms dominate the conversation about rigour in animal research — ARRIVE and PREPARE. They are often mentioned in the same breath, as if interchangeable. They are not. One tells you how to report a study after it is finished; the other tells you how to plan it before it begins. Knowing the difference is the difference between fixing a paper and fixing a study.

You cannot fix a study by reporting it well

A decade of reproducibility audits has made one thing uncomfortably clear: a large fraction of published animal research cannot be reliably reproduced, and the causes are frequently baked in long before a single word of the manuscript is written [5]. Better reporting exposes those problems — it does not prevent them. This is the sentence Norecopa repeats: we cannot improve our research by better reporting alone [3]. ARRIVE and PREPARE sit at opposite ends of the study lifecycle, and that timing is the whole point [1][2].

ARRIVE — the reporting guideline

ARRIVE — Animal Research: Reporting of In Vivo Experiments — is a checklist for describing animal studies transparently and completely enough that others can evaluate and reproduce them [1]. The 2020 revision, ARRIVE 2.0, reorganised the checklist into an Essential 10 — the items without which a study cannot be assessed (study design, sample size, inclusion/exclusion criteria, randomisation, blinding, outcome measures, statistical methods, experimental animals, procedures, and results) — and a Recommended Set that adds context [1][4]. Crucially, ARRIVE operates at the end of the lifecycle: it governs the write-up, not the work [1].

PREPARE — the planning guideline

PREPARE — Planning Research and Experimental Procedures on Animals: Recommendations for Excellence — is Norecopa's checklist for everything that should happen before an animal experiment starts [2][3]. It spans 15 topics in three groups. Formulation of the study: literature searches, legal issues, ethical review and harm–benefit assessment, and experimental design and statistics. Dialogue between scientists and the animal facility: objectives and timescale, facility evaluation, education and training, and health-and-safety risks. Methods: test substances, experimental animals, quarantine and health monitoring, housing and husbandry, experimental procedures, humane killing or rehoming, and necropsy [3].

Here is the part that matters for the comparison. Several PREPARE items — facility evaluation, staff education and training, the dialogue between scientists and technicians, quarantine and health monitoring, housing and husbandry, and necropsy — are not typically highlighted in reporting guidelines at all [3]. These are the upstream, human-and-facility factors that quietly determine whether an experiment is even worth reporting — and they are invisible to a checklist you fill in at submission [3].

The pathway to better research: ten open-science steps from PREPARE (plan) through INFORM, DESIGN, PLAN, PREREGISTER, CONNECT, EXCHANGE, SHARE to ARRIVE (report) and PUBLISH, with PREPARE and ARRIVE circled at each end.
The pathway to better research. PREPARE (step 1) and ARRIVE (step 9) are the circled bookends of one continuous open-science workflow — planning at the start, faithful reporting near the end. Concept adapted from Norecopa (norecopa.no/PREPARE) and the Utrecht IvD open-science pathway [3][6].

One pathway, not two rival checklists

Framed as rivals, ARRIVE and PREPARE force a false choice. Framed as a pathway — the way Norecopa and Utrecht draw it — they are simply two stations on the same line [3][6]. A study moves from PREPARE (plan with the guidelines) through INFORM (a clear non-technical summary), DESIGN (sound experimental design), PLAN (a data-management plan and version control), and PREREGISTER (on preclinicaltrials.eu), then CONNECT, EXCHANGE and SHARE, before it reaches ARRIVE (report faithfully) and PUBLISH — whatever the outcome [6]. PREPARE's payoff, in Norecopa's own summary, is fourfold: better science, improved animal welfare, advancement of the 3Rs, and a safer working environment [3].

The aviation lesson: checklists act before, not after

Norecopa's argument leans on aviation, and the analogy is apt. Pilots run ten to fifteen checklists even on short routine flights — not to document what went wrong afterwards, but to reduce the risk of forgetting a vital action, enforce the right sequence, cross-check between crew, and keep everyone on the same page [3]. The same logic underlies the Swiss-cheese model of failure: weaknesses only cause harm when they line up, and the way to break the alignment is to identify and control the critical points of an experiment in advance — because animals, like aircraft, are complex, tightly-coupled systems where one unmanaged variable propagates [3].

Why this matters for data and metadata

For anyone working on FAIR data or home-cage monitoring, PREPARE lands on a familiar truth: the metadata that makes a dataset reusable is decided at the planning stage, not scraped together at publication [2]. The pathway's PLAN step — a data-management plan and version control set up before the first animal is enrolled — is exactly where housing, husbandry, health-monitoring and procedural details can be captured as structured metadata rather than reconstructed from memory months later [6]. Do the PREPARE work up front and ARRIVE-quality reporting — and genuinely FAIR data — become a by-product of good planning rather than a scramble at the end.

Evidence at a glance

1[1] The ARRIVE guidelines 2.0: updated guidelines for reporting animal research — Percie du Sert N, et al., PLOS B — supports 4 claims in this note; also cited by 3 other Neuronautix notes2[2] PREPARE: guidelines for planning animal research and testing — Smith AJ, Clutton RE, Lilley E, Hansen KEA, Bra — supports 3 claims in this note; also cited by 2 other Neuronautix notes3[3] PREPARE checklist and guidelines — Norecopa (Norwegian 3R centre). The 15-topic checklist, the items not cover — supports 9 claims in this note4[4] ARRIVE guidelines website — NC3Rs. Full text of the Essential 10 and Recommended Set with explanation and elab — supports 1 claim in this note5[5] 1,500 scientists lift the lid on reproducibility — Baker M, Nature, 2016. Survey evidence that a large share o — supports 1 claim in this note6[6] Better animal research through open science — Utrecht University Instantie voor Dierenwelzijn (IvD). The open- — supports 3 claims in this note18claims7 cited claims (38%)1 consensus claim (5%)4 inference claims (22%)5 Neuronautix view claims (27%)1 hypothesis claim (5%)

Cited by other notes Unique to this note Further reading

How this note arguescited 7consensus 1inference 4Neuronautix view 5hypothesis 1

18 marked claims resting on 6 references. Reference [3] is the most load-bearing here, supporting 9 claims. 2 sources are also cited by other Neuronautix notes (amber). 38% of the claims are direct citations; the rest are labelled consensus, inference, Neuronautix view and hypothesis.

References

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